Powerful & Accessible Single Cell Multi Omics Data Analysis

rapid, reproducible & Robust analytics

Intuitive single cell RNA-seq data analysis and exploration on Nygen Analytics

Nygen empowers single-cell data exploration-with confidence.

Intuitive Data Exploration

Self-optimizing analytics engine designed to simplyfy scRNA-seq and multi-omics data analyses. Drag-and-drop features utilizing scientifically validated workflows.

Advanced AI-Enabled Features

Go beyond cell annotation. Designed for deep cell characterization. Perform in-depth disease impact analyses, uncover literature based evidence and identify biomarkers with ease.

Collaborative Bioinformatics Analysis

Host, collaborate, and publish your single cell RNA-seq and multi-omics data. Enables bench scientists and bioinformaticians to collaborate directly within the analysis environment.

Talk to an expert

Get started!

"Nygen's user-friendly interface allows us to explore data rapidly, even without prior coding knowledge. Additionally, its online storage capacity facilitates seamless collaboration, enabling us to share results effortlessly."

Jonathan Baldan, PhD

Postdoctoral Researcher,
Vrije Universiteit, Belgium

"One of the standout features of Nygen is its ability to integrate other single-cell datasets from the literature into our own analysis. This capability has streamlined our workflow by eliminating the need for complicated procedures."

Mattias Magnusson, PhD

Associate Professor
Lund University, Sweden

"Before using Nygen I thought that I needed some knowledge of programming in order to effectively analyse single cell data. However, with Nygen this isn’t necessary and I can easily explore my data in lots of detail and produce attractive figures."

Francis Hopkins

Post Doctoral Researcher
Linköping University, Sweden

"Nygen is enabling me, as a non-bioinformatically trained scientist, to better understand and interact with my single-cell data."

Macarena Oporto Espuelas, PhD

Senior Clinical Research Fellow
University College London, UK

"I enjoyed analyzing public single-cell RNA data using R or Python, but they were difficult for me. (...) With Nygen, I could analyze several data without any stress. It was so amazing and helpful."

Masaki Ishikawa, PhD

Researcher
University of Pennsylvania, USA

solutions

Built for Discovery

Accelerate Discovery

Comprehensive Single Cell Bioinformatics

The industry validated analytics platform with dedicated single‑cell bioinformaticians to accelerate discovery.

Efficiently publish datasets via interactive browsers to enhance visibility, foster collaboration, and accelerate scientific discovery⁠.

Deep Data Insights

CyteType: For Deep Cell Characterization

CyteType is a our multi-LLM agentic cell characterization package for designed for automated cell annotation and beyond.

Drug Discovery

Cell Atlases: An Engine For Drug Discovery

Cell atlases speed drug discovery by revealing cell diversity and function, accelerating target validation, improving trials, and inspiring new therapies.

news & articles

Newsroom

View all posts

IBCH POZNAN Single Cell Analyses Laboratory

Featured Core Facilities

The Laboratory Advancing
Polish Science One Cell at a Time

Inside Poland's Institute of Bioorganic Chemistry, a state-of-the-art laboratory charts an ambitious course for single-cell analysis, combining service excellence with scientific innovation.

CyteType - Nygen Analytics announces Multi-agentic scRNA-seq Annotation and cell characterisation engine

Publications

Preprint: VLP Therapeutics innovative immunotherapy approach for solid tumors

VLP Therapeutics and Nygen Analytics explore an innovative immunotherapy approach for solid tumors by untangling the complex tumour microenvironment.

Press

Nygen Analytics Announces the Release of CyteType

A multi-agent system built to move beyond “cell type annotation” into deeper characterization — integrating markers, lineage, and literature for context you can trust.