Platform Overview
Nygen is a cloud-based platform designed for comprehensive single-cell data analysis. The platform enables researchers to efficiently analyze, explore, and publish large-scale genomic datasets through
Supported Data Types
Supported Modalities
-
Single-cell RNA Sequencing (scRNA-seq) analysis
-
CITE-seq for surface protein quantification
-
Spatial transcriptomics visualization
-
BCR/TCR sequencing with clonotype analysis
Technology Compatibility
The platform is technology-agnostic, supporting data from multiple commercial droplet and plate-based methods.
Core Platform Features
Data Management
-
Advanced dataset merging and subsetting capabilities
-
Comprehensive metadata integration
-
Flexible data organization system
-
Version tracking and management
Infrastructure and Security
-
Deployment across 20 AWS global regions
-
Strict data residency enforcement
-
ISO 27001-compliant infrastructure
-
GDPR-compliant data handling
- Processing of count matrices only
- No raw sequencing data storage
Cloud Implementation
-
Browser-based interface
-
No local installation required
-
User-selected server location
-
Scalable computation resources, all analysis executed immediately and no job queuing
-
Real-time collaboration capabilities
