GitHub View CyteType

Installation

Install the CyteType Python or R client for your annotation workflow.

Install the CyteType client for your preferred environment.

pip install cytetype
install.packages("devtools")
library(devtools)
install_github("NygenAnalytics/CyteTypeR")

Python requires Python ≥ 3.12. R requires R ≥ 4.1.0 and devtools for the GitHub install of CyteTypeR.

💡 Tip: For an interactive walkthrough, use the Google Colab tutorial.

Learn more

Prerequisites

First annotation