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Interactive Cluster Copilot

Ask cluster-specific biology questions grounded in CyteType expression and pathway context.

What it is

A built-in chat interface connected to that cluster's expression data and pathway context. Ask biological questions and get data-grounded answers.

How to use it

Ask questions like: "Why does this cluster express CXCL13?" or "What differentiates this cluster from the neighboring CD8 T cells?". Answers are grounded in your actual expression matrix, not generic responses.

When to use it

Use this to resolve interpretation questions in-context before escalating to manual analysis or posting to a lab meeting.

💡 Tip: If you disagree with an annotation, the HTML report also supports manual override and re-annotation requests. Changes are logged.

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Decision traceability

Claude MCP connector