No-Code Marker Gene Identification Workflow in ScarfWeb
Find marker genes in scRNA-seq without code using ScarfWeb. Step-by-step walkthrough from upload and QC through clustering, marker detection, pseudotime, and export.
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A curated index of articles, updates, events, and published work across single-cell research.
UMH Alicante x Nygen - Accelerated Single Cell Data Analysis Course
Hands-on single-cell data analysis course at UMH Alicante.
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Accelerate Marker Gene Detection in scRNA-seq: A No-Code Approach
Uncover the essentials of marker gene identification in single-cell RNA sequencing. This article covers no-code solutions, methodologies, and case studies across various fields.
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Med Uni Graz x Nygen - Accelerated Single Cell Data Analysis Course
Accelerated single-cell data analysis course with Medical University of Graz.
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Designing Robust Single-Cell RNA-Seq Experiments: A Practical Guide
Learn the essentials of designing robust single-cell RNA-seq experiments with our practical guide for wet-lab scientists. Covers sample preparation, controls, sequencing parameters, and analysis approaches, including how no-code platforms eliminate computational barriers.
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AGI is Far, but ASI is Here
Explore how ASI transforms drug discovery by harnessing domain-specific models and advanced computing tools for faster, smarter biomedical innovation.
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A Practical Guide to Single-Cell RNA-Seq Cluster Annotation
How to annotate scRNA-seq clusters in 2026: marker genes, reference mapping, supervised tools, and separating cell identity from cell state.
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Best scRNA-seq Analysis Tools in 2026: Compared
Compare ScarfWeb, Loupe Browser, Trailmaker, Partek Flow, BBrowserX Pro, Omics Playground, Pluto Bio, and ROSALIND for scRNA-seq and multi-omics analysis in 2026.
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Transcriptional Roadmap of the Human Airway Epithelium Identifying HLF as a Novel Regulator of Basal Stem Cell Function
Pavan Prabhala et al. map the transcriptional landscape of human airway epithelium, identifying HLF as a key regulator.
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Chromatin Accessibility Shapes Developmental-Specific Lineage Plasticity in Hematopoiesis
Sara Palo et al. reveal how chromatin accessibility patterns shape lineage plasticity during blood cell development.
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Alphavirus replicon particle expressing IL-12 reprograms tumor-associated macrophages and neutrophils and induces anti-tumor immunity
Momoko Ishikawa et al. show IL-12-expressing alphavirus particles reprogram tumor immune cells to induce anti-tumor responses.
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Multi-agent AI enables evidence-based cell annotation in single-cell transcriptomics
Gautam Ahuja et al. demonstrate how multi-agent AI systems enable evidence-based cell annotation in scRNA-seq data.
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Building Cell Atlases: Mapping Biology Like Google Maps
Discover how building cell atlases parallels Google Maps - transforming scattered cellular data into integrated, navigable maps for drug discovery.
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Batch Effect Correction and Normalization in scRNA-Seq
Compare scRNA-seq normalization and batch correction methods, with current Seurat, Scanpy, Monocle 3, scran, Harmony, BBKNN and scVI workflows.
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Navigating the Complexity of Single-Cell RNA-Seq Data Analysis
Explore key challenges and advanced strategies in scRNA-seq data analysis for both new and experienced researchers.
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