The biology in your ligand-receptor analysis, and how to read it
Ligand-receptor analysis is easy to run and easy to over-read. How to get cell-cell communication biology from the ranked table, with LIANA and ScarfWeb.
Read more →Resources
A curated index of articles, updates, events, and published work across single-cell research.
Multi-Omics Data for Target ID in Drug Discovery
How human genetics, single-cell transcriptomics, chromatin accessibility and proteomics combine into causal, cell-resolved target evidence, where integration usually fails, and how to grade the result before a programme is committed.
Read more →
HVG selection
Learn how to select Highly Variable Genes (HVGs) in single-cell data, set corrected variance thresholds, and use custom blocklists to refine your analysis while ensuring meaningful cell heterogeneity.
Read more →
Spatial Transcriptomics and scRNA-seq: A Complementary Pair
The current state of spatial transcriptomics and scRNA-seq: single-cell-resolution platforms, foundation models for integration, spatial multi-omics, and 3D tissue atlases.
Read more →
Integrating Spatial Transcriptomics with Single-cell RNA-seq
How to integrate spatial transcriptomics with scRNA-seq: when spatial context helps, the key integration methods, and worked tissue examples.
Read more →
When is Single-cell RNA-seq Enough, and When Do You Need Spatial Data?
When is scRNA-seq enough on its own? A guide to its use cases, the workflow from clustering to cell type annotation, and when to add spatial data.
Read more →
No-Code Marker Gene Identification Workflow in ScarfWeb
Find marker genes in scRNA-seq without code using ScarfWeb. Step-by-step walkthrough from upload and QC through clustering, marker detection, pseudotime, and export.
Read more →
Accelerate Marker Gene Detection in scRNA-seq: A No-Code Approach
Uncover the essentials of marker gene identification in single-cell RNA sequencing. This article covers no-code solutions, methodologies, and case studies across various fields.
Read more →
Designing Robust Single-Cell RNA-Seq Experiments: A Practical Guide
Learn the essentials of designing robust single-cell RNA-seq experiments with our practical guide for wet-lab scientists. Covers sample preparation, controls, sequencing parameters, and analysis approaches, including how no-code platforms eliminate computational barriers.
Read more →
A Practical Guide to Single-Cell RNA-Seq Cluster Annotation
How to annotate scRNA-seq clusters in 2026: marker genes, reference mapping, supervised tools, and separating cell identity from cell state.
Read more →
Building Cell Atlases: Mapping Biology Like Google Maps
Discover how building cell atlases parallels Google Maps - transforming scattered cellular data into integrated, navigable maps for drug discovery.
Read more →
Batch Effect Correction and Normalization in scRNA-Seq
Compare scRNA-seq normalization and batch correction methods, with current Seurat, Scanpy, Monocle 3, scran, Harmony, BBKNN and scVI workflows.
Read more →
What is Single Cell Transcriptomics?
Discover single-cell transcriptomics, a transformative technique for analyzing gene expression at the cellular level in biology and medicine.
Read more →
Overcoming Bioinformatics Skill Gaps in Single-Cell Research
Discover solutions to bridge bioinformatics skill gaps in single-cell research, enabling easier scRNA-seq analysis for wet-lab scientists.
Read more →
Navigating the Complexity of Single-Cell RNA-Seq Data Analysis
Explore key challenges and advanced strategies in scRNA-seq data analysis for both new and experienced researchers.
Read more →